Associate Professor Fabio Luciani

Luciani F; Zaikin A, 2006, 'Mathematical models of the proteasome product size distribution', in Schimansky-Geier L; Malchow H; Poeschel T (ed.), Irreversible Prozesse und Selbstorganisation, edn. 1, Logos-Verlag, Berlin, pp. 196 - 208

Luciani F; Zaikin A, 2006, 'Mathematical models of the proteasome product size', in Schimansky Geier L; Malchow H; Poeschel T (ed.), Irreversible Prozesse und Selbstorganisation, edn. 1, Logos-Verlag, Berlin, pp. 279 - 292

Zhao Y; Cai C; Samir J; Palgen JL; Keoshkerian E; Li H; Bull RA; Luciani F; An H; Lloyd AR, 2021, 'Human CD8 T-stem cell memory subsets phenotypic and functional characterization are defined by expression of CD122 or CXCR3', European Journal of Immunology, vol. 51, pp. 1732 - 1747, http://dx.doi.org/10.1002/eji.202049057

Sullivan LC; Nguyen THO; Harpur CM; Stankovic S; Kanagarajah AR; Koutsakos M; Saunders PM; Cai Z; Gray JA; Widjaja JML; Lin J; Pietra G; Mingari MC; Moretta L; Samir J; Luciani F; Westall GP; Malmberg KJ; Kedzierska K; Brooks AG, 2021, 'Natural killer cell receptors regulate responses of HLA-E-restricted T cells', Science Immunology, vol. 6, http://dx.doi.org/10.1126/sciimmunol.abe9057

Sutton HJ; Aye R; Idris AH; Vistein R; Nduati E; Kai O; Mwacharo J; Li X; Gao X; Andrews TD; Koutsakos M; Nguyen THO; Nekrasov M; Milburn P; Eltahla A; Berry AA; KC N; Chakravarty S; Sim BKL; Wheatley AK; Kent SJ; Hoffman SL; Lyke KE; Bejon P; Luciani F; Kedzierska K; Seder RA; Ndungu FM; Cockburn IA, 2021, 'Atypical B cells are part of an alternative lineage of B cells that participates in responses to vaccination and infection in humans', Cell Reports, vol. 34, http://dx.doi.org/10.1016/j.celrep.2020.108684

Louie RHY; Luciani F, 2021, 'Recent advances in single-cell multimodal analysis to study immune cells', Immunology and Cell Biology, vol. 99, pp. 157 - 167, http://dx.doi.org/10.1111/imcb.12432

Kwon JA; Chambers GM; Luciani F; Zhang L; Kinathil S; Kim D; Thein HH; Botha W; Thompson S; Lloyd A; Yap L; Gray RT; Butler T, 2021, 'Hepatitis C treatment strategies in prisons: A cost-effectiveness analysis', PLoS ONE, vol. 16, pp. e0245896, http://dx.doi.org/10.1371/journal.pone.0245896

Foster S; Luciani F, 2021, 'Omics in immunology', Immunology and Cell Biology, vol. 99, pp. 133 - 134, http://dx.doi.org/10.1111/imcb.12435

Lim CS; Sozzi V; Littlejohn M; Yuen LKW; Warner N; Betz-Stablein B; Luciani F; Revill PA; Brown CM, 2021, 'Quantitative analysis of the splice variants expressed by the major hepatitis B virus genotypes', Microbial Genomics, vol. 7, pp. 1 - 13, http://dx.doi.org/10.1099/mgen.0.000492

Gottlieb DJ; Clancy LE; Withers B; McGuire HM; Luciani F; Singh M; Hughes B; Gloss B; Kliman D; Ma CKK; Panicker S; Bishop D; Dubosq MC; Li Z; Avdic S; Micklethwaite K; Blyth E, 2021, 'Prophylactic antigen-specific T-cells targeting seven viral and fungal pathogens after allogeneic haemopoietic stem cell transplant', Clinical and Translational Immunology, vol. 10, pp. e1249, http://dx.doi.org/10.1002/cti2.1249

Adikari TN; Riaz N; Sigera C; Leung P; Valencia BM; Barton K; Smith MA; Bull RA; Li H; Luciani F; Weeratunga P; Thein TL; Lim VWX; Leo YS; Rajapakse S; Fink K; Lloyd AR; Fernando D; Rodrigo C, 2020, 'Single molecule, near full-length genome sequencing of dengue virus', Scientific Reports, vol. 10, http://dx.doi.org/10.1038/s41598-020-75374-1

Adikari TN; Di Giallonardo F; Leung P; Grifoni A; Sette A; Weiskopf D; Bull RA; Luciani F, 2020, 'Conserved epitopes with high HLA-I population coverage are targets of CD8⁺ T cells associated with high IFN-γ responses against all dengue virus serotypes', Scientific Reports, vol. 10, http://dx.doi.org/10.1038/s41598-020-77565-2

Bull RA; Adikari TN; Ferguson JM; Hammond JM; Stevanovski I; Beukers AG; Naing Z; Yeang M; Verich A; Gamaarachchi H; Kim KW; Luciani F; Stelzer-Braid S; Eden JS; Rawlinson WD; van Hal SJ; Deveson IW, 2020, 'Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis', Nature Communications, vol. 11, pp. 6272, http://dx.doi.org/10.1038/s41467-020-20075-6

Sironi M; Hasnain SE; Rosenthal B; Phan T; Luciani F; Shaw MA; Sallum MA; Mirhashemi ME; Morand S; González-Candelas F, 2020, 'SARS-CoV-2 and COVID-19: A genetic, epidemiological, and evolutionary perspective', Infection, Genetics and Evolution, vol. 84, pp. 104384, http://dx.doi.org/10.1016/j.meegid.2020.104384

Niño JLG; Pageon SV; Tay SS; Colakoglu F; Kempe D; Hywood J; Mazalo JK; Cremasco J; Govendir MA; Dagley LF; Hsu K; Rizzetto S; Zieba J; Rice G; Prior V; O’neill G; Williams RJ; Nisbet DR; Kramer B; Webb AI; Luciani F; Read MN; Biro M, 2020, 'Cytotoxic T cells swarm by homotypic chemokine signalling', eLife, vol. 9, pp. 1 - 71, http://dx.doi.org/10.7554/eLife.56554

Castellano-González G; McGuire HM; Luciani F; Clancy LE; Li Z; Avdic S; Hughes B; Singh M; De St Groth BF; Renga G; Pariano M; Bellet MM; Romani L; Gottlieb DJ, 2020, 'Rapidly expanded partially HLA DRB1-matched fungus-specific T cells mediate in vitro and in vivo antifungal activity', Blood Advances, vol. 4, pp. 3443 - 3456, http://dx.doi.org/10.1182/bloodadvances.2020001565

Bretaña NA; Gray RR; Cunningham EB; Betz-Stablein B; Ribeiro R; Graw F; Luciani F; Lloyd AR, 2020, 'Combined treatment and prevention strategies for hepatitis C virus elimination in the prisons in New South Wales: a modelling study', Addiction, vol. 115, pp. 901 - 913, http://dx.doi.org/10.1111/add.14830

Li H; Cameron B; Douglas D; Stapleton S; Cheguelman G; Butler T; Luciani F; Lloyd AR, 2020, 'Incident hepatitis B virus infection and immunisation uptake in Australian prison inmates', Vaccine, vol. 38, pp. 3255 - 3260, http://dx.doi.org/10.1016/j.vaccine.2020.02.076

Brasher NA; Eltahla AA; Underwood A; Boo I; Rizzetto S; Walker MR; Rodrigo C; Luciani F; Maher L; Drummer HE; Tedla N; Lloyd AR; Bull RA, 2020, 'B cell immunodominance in primary hepatitis C virus infection', Journal of Hepatology, vol. 72, pp. 670 - 679, http://dx.doi.org/10.1016/j.jhep.2019.11.011

Singh M; Jackson KJL; Wang JJ; Schofield P; Field MA; Koppstein D; Peters TJ; Burnett DL; Rizzetto S; Nevoltris D; Masle-Farquhar E; Faulks ML; Russell A; Gokal D; Hanioka A; Horikawa K; Colella AD; Chataway TK; Blackburn J; Mercer TR; Langley DB; Goodall DM; Jefferis R; Gangadharan Komala M; Kelleher AD; Suan D; Rischmueller M; Christ D; Brink R; Luciani F; Gordon TP; Goodnow CC; Reed JH, 2020, 'Lymphoma Driver Mutations in the Pathogenic Evolution of an Iconic Human Autoantibody', Cell, vol. 180, pp. 878 - 894.e19, http://dx.doi.org/10.1016/j.cell.2020.01.029

Samir J; Rizzetto S; Gupta M; Luciani F, 2020, 'Exploring and analysing single cell multi-omics data with VDJView', BMC Medical Genomics, vol. 13, pp. 29, http://dx.doi.org/10.1186/s12920-020-0696-z

Bagaev DV; Vroomans RMA; Samir J; Stervbo U; Rius C; Dolton G; Greenshields-Watson A; Attaf M; Egorov ES; Zvyagin IV; Babel N; Cole DK; Godkin AJ; Sewell AK; Kesmir C; Chudakov DM; Luciani F; Shugay M, 2020, 'VDJdb in 2019: Database extension, new analysis infrastructure and a T-cell receptor motif compendium', Nucleic Acids Research, vol. 48, pp. D1057 - D1062, http://dx.doi.org/10.1093/nar/gkz874

McGuire HM; Rizzetto S; Withers BP; Clancy LE; Avdic S; Stern L; Patrick E; Fazekas de St Groth B; Slobedman B; Gottlieb DJ; Luciani F; Blyth E, 2020, 'Mass cytometry reveals immune signatures associated with cytomegalovirus (CMV) control in recipients of allogeneic haemopoietic stem cell transplant and CMV-specific T cells', Clinical and Translational Immunology, vol. 9, pp. e1149, http://dx.doi.org/10.1002/cti2.1149

Lee KH; Gowrishankar K; Street J; McGuire HM; Luciani F; Hughes B; Singh M; Clancy LE; Gottlieb DJ; Micklethwaite KP; Blyth E, 2020, 'Ex vivo enrichment of PRAME antigen-specific T cells for adoptive immunotherapy using CD137 activation marker selection', Clinical and Translational Immunology, vol. 9, http://dx.doi.org/10.1002/cti2.1200

Kim KW; Horton JL; Pang CNI; Jain K; Leung P; Isaacs SR; Bull RA; Luciani F; Wilkins MR; Catteau J; Lipkin WI; Rawlinson WD; Briese T; Craig ME, 2019, 'Higher abundance of enterovirus A species in the gut of children with islet autoimmunity', Scientific Reports, vol. 9, pp. 1749, http://dx.doi.org/10.1038/s41598-018-38368-8

Singh M; Al-Eryani G; Carswell S; Ferguson JM; Blackburn J; Barton K; Roden D; Luciani F; Giang Phan T; Junankar S; Jackson K; Goodnow CC; Smith MA; Swarbrick A, 2019, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', Nature Communications, vol. 10, pp. 3120, http://dx.doi.org/10.1038/s41467-019-11049-4

Walker MR; Leung P; Eltahla AA; Underwood A; Abayasingam A; Brasher NA; Li H; Wu BR; Maher L; Luciani F; Lloyd AR; Bull RA, 2019, 'Clearance of hepatitis C virus is associated with early and potent but narrowly-directed, Envelope-specific antibodies', Scientific Reports, vol. 9, pp. 13300, http://dx.doi.org/10.1038/s41598-019-49454-w

Abayasingam A; Leung P; Eltahla A; Bull RA; Luciani F; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Cox AL; Kim AY; Schinkel J; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Lloyd A; Rodrigo C, 2019, 'Genomic characterization of hepatitis C virus transmitted founder variants with deep sequencing', Infection, Genetics and Evolution, vol. 71, pp. 36 - 41, http://dx.doi.org/10.1016/j.meegid.2019.02.032

Koutsakos M; Illing PT; Nguyen THO; Mifsud NA; Crawford JC; Rizzetto S; Eltahla AA; Clemens EB; Sant S; Chua BY; Wong CY; Allen EK; Teng D; Dash P; Boyd DF; Grzelak L; Zeng W; Hurt AC; Barr I; Rockman S; Jackson DC; Kotsimbos TC; Cheng AC; Richards M; Westall GP; Loudovaris T; Mannering SI; Elliott M; Tangye SG; Wakim LM; Rossjohn J; Vijaykrishna D; Luciani F; Thomas PG; Gras S; Purcell AW; Kedzierska K, 2019, 'Human CD8 ⁺ T cell cross-reactivity across influenza A, B and C viruses', Nature Immunology, vol. 20, pp. 613 - 625, http://dx.doi.org/10.1038/s41590-019-0320-6

Keck ZY; Pierce BG; Lau P; Lu J; Wang Y; Underwood A; Bull RA; Prentoe J; Velázquez-Moctezuma R; Walker MR; Luciani F; Guest JD; Fauvelle C; Baumert TF; Bukh J; Lloyd AR; Foung SKH, 2019, 'Broadly neutralizing antibodies from an individual that naturally cleared multiple hepatitis c virus infections uncover molecular determinants for E2 targeting and vaccine design', PLoS Pathogens, vol. 15, pp. e1007772, http://dx.doi.org/10.1371/journal.ppat.1007772

Pirozyan MR; Nguyen N; Cameron B; Luciani F; Bull RA; Zekry A; Lloyd AR, 2019, 'Chemokine-Regulated Recruitment of Antigen-Specific T-Cell Subpopulations to the Liver in Acute and Chronic Hepatitis C Infection', Journal of Infectious Diseases, vol. 219, pp. 1430 - 1438, http://dx.doi.org/10.1093/infdis/jiy679

Rodrigo C; Leung P; Lloyd AR; Bull RA; Luciani F; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Cox AL; Osburn W; Kim AY; Shoukry NH; Lauer GM; Maher L; Schinkel J; Prins M; Hellard M; Eltahla AA, 2019, 'Genomic variability of within-host hepatitis C variants in acute infection', Journal of Viral Hepatitis, vol. 26, pp. 476 - 484, http://dx.doi.org/10.1111/jvh.13051

Rodrigo C; Luciani F, 2019, 'Dynamic interactions between RNA viruses and human hosts unravelled by a decade of next generation sequencing', Biochimica et Biophysica Acta - General Subjects, vol. 1863, pp. 511 - 519, http://dx.doi.org/10.1016/j.bbagen.2018.12.003

Wang Z; Zhu L; Nguyen THO; Wan Y; Sant S; Quiñones-Parra SM; Crawford JC; Eltahla AA; Rizzetto S; Bull RA; Qiu C; Koutsakos M; Clemens EB; Loh L; Chen T; Liu L; Cao P; Ren Y; Kedzierski L; Kotsimbos T; McCaw JM; La Gruta NL; Turner SJ; Cheng AC; Luciani F; Zhang X; Doherty PC; Thomas PG; Xu J; Kedzierska K, 2018, 'Clonally diverse CD38⁺HLA-DR⁺CD8⁺ T cells persist during fatal H7N9 disease', Nature Communications, vol. 9, http://dx.doi.org/10.1038/s41467-018-03243-7

Isaacs SR; Kim KW; Cheng JX; Bull RA; Stelzer-Braid S; Luciani F; Rawlinson WD; Craig ME, 2018, 'Amplification and next generation sequencing of near full-length human enteroviruses for identification and characterisation from clinical samples', Scientific Reports, vol. 8, http://dx.doi.org/10.1038/s41598-018-30322-y

Moran I; Nguyen A; Khoo WH; Butt D; Bourne K; Young C; Hermes JR; Biro M; Gracie G; Ma CS; Munier CML; Luciani F; Zaunders J; Parker A; Kelleher AD; Tangye SG; Croucher PI; Brink R; Read MN; Phan TG, 2018, 'Memory B cells are reactivated in subcapsular proliferative foci of lymph nodes', Nature Communications, vol. 9, http://dx.doi.org/10.1038/s41467-018-05772-7

Underwood AP; Walker MR; Brasher NA; Eltahla AA; Maher L; Luciani F; Lloyd AR; Bull RA, 2018, 'Understanding the determinants of BnAb induction in acute HCV infection', Viruses, vol. 10, http://dx.doi.org/10.3390/v10110659

Singh M; Al-Eryani G; Carswell S; Ferguson J; Blackburn J; Barton K; Roden D; Luciani F; Phan T; Junankar S; Jackson K; Goodnow C; Smith M; Swarbrick A, 2018, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes, http://dx.doi.org/10.1101/424945

Rizzetto S; Koppstein DNP; Samir J; Singh M; Reed JH; Cai CH; Lloyd AR; Eltahla AA; Goodnow CC; Luciani F, 2018, 'B-cell receptor reconstruction from single-cell RNA-seq with VDJPuzzle', Bioinformatics, vol. 34, pp. 2846 - 2847, http://dx.doi.org/10.1093/BIOINFORMATICS/BTY171

Stern L; McGuire H; Avdic S; Rizzetto S; Fazekas de St Groth B; Luciani F; Slobedman B; Blyth E, 2018, 'Mass Cytometry for the assessment of immune reconstitution after hematopoietic stem cell transplantation', Frontiers in Immunology, vol. 9, http://dx.doi.org/10.3389/fimmu.2018.01672

Cunningham EB; Hajarizadeh B; Amin J; Bretana N; Dore GJ; Degenhardt L; Larney S; Luciani F; Lloyd AR; Grebely J, 2018, 'Longitudinal injecting risk behaviours among people with a history of injecting drug use in an Australian prison setting: The HITS-p study', International Journal of Drug Policy, vol. 54, pp. 18 - 25, http://dx.doi.org/10.1016/j.drugpo.2017.12.013

Shugay M; Bagaev DV; Zvyagin IV; Vroomans RM; Crawford JC; Dolton G; Komech EA; Sycheva AL; Koneva AE; Egorov ES; Eliseev AV; Van Dyk E; Dash P; Attaf M; Rius C; Ladell K; McLaren JE; Matthews KK; Clemens EB; Douek DC; Luciani F; Van Baarle D; Kedzierska K; Kesmir C; Thomas PG; Price DA; Sewell AK; Chudakov DM, 2018, 'VDJdb: A curated database of T-cell receptor sequences with known antigen specificity', Nucleic Acids Research, vol. 46, pp. D419 - D427, http://dx.doi.org/10.1093/nar/gkx760

Rizzetto S; Eltahla AA; Lin P; Bull R; Lloyd AR; Ho JWK; Venturi V; Luciani F, 2017, 'Impact of sequencing depth and read length on single cell RNA sequencing data of T cells', Scientific Reports, vol. 7, http://dx.doi.org/10.1038/s41598-017-12989-x

Cunningham EB; Hajarizadeh B; Bretana NA; Amin J; Betz-Stablein B; Dore GJ; Luciani F; Teutsch S; Dolan K; Lloyd AR; Grebely J; Haber P; Rawlinson W; Treloar C; Maher L, 2017, 'Ongoing incident hepatitis C virus infection among people with a history of injecting drug use in an Australian prison setting, 2005-2014: The HITS-p study', Journal of Viral Hepatitis, vol. 24, pp. 733 - 741, http://dx.doi.org/10.1111/jvh.12701

Merani S; Lucas M; Deshpande P; Pfafferott K; Chopra A; Cooper D; Leary S; Luciani F; Gaudieri S, 2017, 'Influence of transmitted virus on the host's immune response: A case study', Viral Immunology, vol. 30, pp. 533 - 541, http://dx.doi.org/10.1089/vim.2017.0001

Rizzetto S; Koppstein DNP; Samir J; Singh M; Reed J; Cai C; Lloyd A; Eltahla A; Goodnow C; Luciani F, 2017, 'B-cell receptor reconstruction from single-cell RNA-seq with VDJPuzzle', , http://dx.doi.org/10.1101/181156

Sierro F; Evrard M; Rizzetto S; Melino M; Mitchell AJ; Florido M; Beattie L; Walters SB; Tay SS; Lu B; Holz LE; Roediger B; Wong YC; Warren A; Ritchie W; McGuffog C; Weninger W; Le Couteur DG; Ginhoux F; Britton WJ; Heath WR; Saunders BM; McCaughan GW; Luciani F; MacDonald KPA; Ng LG; Bowen DG; Bertolino P, 2017, 'A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment', Immunity, vol. 47, pp. 374 - 388.e6, http://dx.doi.org/10.1016/j.immuni.2017.07.018

Leung P; Eltahla AA; Lloyd AR; Bull RA; Luciani F, 2017, 'Understanding the complex evolution of rapidly mutating viruses with deep sequencing: Beyond the analysis of viral diversity', Virus Research, vol. 239, pp. 43 - 54, http://dx.doi.org/10.1016/j.virusres.2016.10.014

Luciani F; Paolantonio G; Calabrese C; Calabrese L, 2017, 'Cytology and molecular mechanisms of drug-induced gingival hypertrophy: A rewiew', ORAL and Implantology, vol. 10, pp. 221 - 228, http://dx.doi.org/10.11138/orl/2017.10.3.221

Ottria L; Luciani F; Piva P; Alagna AM; Arcuri C; Bartuli FN, 2017, 'The flap recovery on the impacted lower third molar surgery comparing 3 different flap designs: A clinical study', ORAL and Implantology, vol. 10, pp. 270 - 275, http://dx.doi.org/10.11138/orl/2017.10.3.270

Rizzetto S; Eltahla A; Lin P; Bull R; Lloyd A; Ho J; Venturi V; Luciani F, 2017, 'Impact of sequencing depth and read length on single cell RNA sequencing data: lessons from T cells', , http://dx.doi.org/10.1101/134130

Rodrigo C; Walker MR; Leung P; Eltahla AA; Grebely J; Dore GJ; Applegate T; Page K; Dwivedi S; Bruneau J; Morris MD; Cox AL; Osburn W; Kim AY; Schinkel J; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Luciani F; Lloyd AR; Bull RA, 2017, 'Limited naturally occurring escape in broadly neutralizing antibody epitopes in hepatitis C glycoprotein E2 and constrained sequence usage in acute infection', Infection, Genetics and Evolution, vol. 49, pp. 88 - 96, http://dx.doi.org/10.1016/j.meegid.2017.01.006

Eltahla AA; Leung P; Pirozyan MR; Rodrigo C; Grebely J; Applegate T; Maher L; Luciani F; Lloyd AR; Bull RA, 2017, 'Dynamic evolution of hepatitis C virus resistance-associated substitutions in the absence of antiviral treatment', Scientific Reports, vol. 7, http://dx.doi.org/10.1038/srep41719

Rodrigo C; Eltahla AA; Bull RA; Luciani F; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Morris MD; Cox AL; Osburn W; Kim AY; Shoukry NH; Lauer GM; Maher L; Schinkel J; Prins M; Hellard M; Lloyd AR, 2017, 'Phylogenetic analysis of full-length, early infection, hepatitis C virus genomes among people with intravenous drug use: the InC³ Study', Journal of Viral Hepatitis, vol. 24, pp. 43 - 52, http://dx.doi.org/10.1111/jvh.12616

Eltahla AA; Rodrigo C; Betz-Stablein B; Grebely J; Applegate T; Luciani F; Schinkel J; Dore GJ; Page K; Bruneau J; Morris MD; Cox AL; Kim AY; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Lloyd AR; Bull RA, 2017, 'Analysis of resistance-associated substitutions in acute hepatitis C virus infection by deep sequencing across six genotypes and three continents', Journal of Viral Hepatitis, vol. 24, pp. 37 - 42, http://dx.doi.org/10.1111/jvh.12615

Cunningham E; Amin J; Bretana NA; Luciani F; Degenhardt L; Larney S; Hajarizadeh B; Dore GJ; Lloyd A; Grebely J, 2017, 'P10 Injecting risk behaviours among people who inject drugs in an Australian prison setting, 2005–2014: the HITS-p study', Journal of Virus Eradication, vol. 3, pp. 15 - 16, http://dx.doi.org/10.1016/s2055-6640(20)30751-2

Keoshkerian E; Hunter M; Cameron B; Nguyen N; Sugden P; Bull R; Zekry A; Maher L; Seddiki N; Zaunders J; Kelleher A; Lloyd AR; Dolan K; Haber P; Rawlinson W; Treloar C; Dore G; Luciani F, 2016, 'Hepatitis C-specific effector and regulatory CD4 T-cell responses are associated with the outcomes of primary infection', Journal of Viral Hepatitis, vol. 23, pp. 985 - 993, http://dx.doi.org/10.1111/jvh.12576

Rodrigo C; Eltahla AA; Bull RA; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Morris MD; Cox AL; Osburn W; Kim AY; Schinkel J; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Estes C; Razavi H; Lloyd AR; Luciani F, 2016, 'Historical Trends in the Hepatitis C Virus Epidemics in North America and Australia', Journal of Infectious Diseases, vol. 214, pp. 1383 - 1389, http://dx.doi.org/10.1093/infdis/jiw389

Youngson N; Lecomte V; Maloney C; Leung P; Liu J; Hesson L; Luciani F; Krause L; Morris M, 2016, 'Obesity-induced sperm DNA methylation changes at satellite repeats are reprogrammed in rat offspring', Asian Journal of Andrology, vol. 18, pp. 930 - 936, http://dx.doi.org/10.4103/1008-682X.163190

Eltahla AA; Rizzetto S; Pirozyan MR; Betz-Stablein BD; Venturi V; Kedzierska K; Lloyd AR; Bull RA; Luciani F, 2016, 'Linking the T cell receptor to the single cell transcriptome in antigen-specific human T cells', Immunology and Cell Biology, vol. 94, pp. 604 - 611, http://dx.doi.org/10.1038/icb.2016.16

Walker MR; Li H; Teutsch S; Betz-Stablein B; Luciani F; Lloyd AR; Bull RA, 2016, 'Incident hepatitis c virus genotype distribution and multiple infection in australian prisons', Journal of Clinical Microbiology, vol. 54, pp. 1855 - 1861, http://dx.doi.org/10.1128/JCM.00287-16

Audsley J; Bent SJ; Littlejohn M; Avihingsanon A; Matthews G; Bowden S; Bayliss J; Luciani F; Yuen L; Fairley CK; Locarnini S; Lewin SR; Sasadeusz J, 2016, 'Effects of long-term tenofovir-based combination antiretroviral therapy in HIV-hepatitis B virus coinfection on persistent hepatitis B virus viremia and the role of hepatitis B virus quasispecies diversity', AIDS, vol. 30, pp. 1597 - 1606, http://dx.doi.org/10.1097/QAD.0000000000001080

Mina MM; Cameron B; Luciani F; Vollmer-Conna U; Lloyd AR, 2016, 'Natural killer cells in highly exposed hepatitis C-seronegative injecting drug users', Journal of Viral Hepatitis, vol. 23, pp. 464 - 472, http://dx.doi.org/10.1111/jvh.12511

Fiches GN; Eyre NS; Aloia AL; Van Der Hoek K; Betz-Stablein B; Luciani F; Chopra A; Beard MR, 2016, 'HCV RNA traffic and association with NS5A in living cells', Virology, vol. 493, pp. 60 - 74, http://dx.doi.org/10.1016/j.virol.2016.02.016

Luciani F, 2016, 'High-throughput sequencing and vaccine design', OIE Revue Scientifique et Technique, vol. 35, pp. 53 - 65, http://dx.doi.org/10.20506/rst.35.1.2417

Bull RA; Eltahla AA; Rodrigo C; Koekkoek SM; Walker M; Pirozyan MR; Betz-Stablein B; Toepfer A; Laird M; Oh S; Heiner C; Maher L; Schinkel J; Lloyd AR; Luciani F, 2016, 'A method for near full-length amplification and sequencing for six hepatitis C virus genotypes', BMC Genomics, vol. 17, http://dx.doi.org/10.1186/s12864-016-2575-8

Bartlett SR; Jacka B; Bull RA; Luciani F; Matthews GV; Lamoury FMJ; Hellard ME; Hajarizadeh B; Teutsch S; White B; Maher L; Dore GJ; Lloyd AR; Grebely J; Applegate TL, 2016, 'HIV infection and hepatitis C virus genotype 1a are associated with phylogenetic clustering among people with recently acquired hepatitis C virus infection', Infection, Genetics and Evolution, vol. 37, pp. 252 - 258, http://dx.doi.org/10.1016/j.meegid.2015.11.028

Betz-Stablein BD; Töpfer A; Littlejohn M; Yuen L; Colledge D; Sozzi V; Angus P; Thompson A; Revill P; Beerenwinkel N; Warner N; Luciani F, 2016, 'Single-molecule sequencing reveals complex genome variation of hepatitis B virus during 15 Years of chronic infection following liver transplantation', Journal of Virology, vol. 90, pp. 7171 - 7183, http://dx.doi.org/10.1128/JVI.00243-16

Budzinska MA; Tu T; d'Avigdor WMH; McCaughan GW; Luciani F; Shackel NA, 2016, 'Accumulation of Deleterious Passenger Mutations Is Associated with the Progression of Hepatocellular Carcinoma.', PLoS One, vol. 11, pp. e0162586, http://dx.doi.org/10.1371/journal.pone.0162586

Giannitelli SM; Basoli F; Mozetic P; Piva P; Bartuli FN; Luciani F; Arcuri C; Trombetta M; Rainer A; Licoccia S, 2015, 'Graded porous polyurethane foam: A potential scaffold for oro-maxillary bone regeneration', Materials Science and Engineering C, vol. 51, pp. 329 - 335, http://dx.doi.org/10.1016/j.msec.2015.03.002

Zarzour P; Boelen L; Luciani F; Beck D; Sakthianandeswaren A; Mouradov D; Sieber OM; Hawkins NJ; Hesson LB; Ward RL; Wong JWH, 2015, 'Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas', Genes Chromosomes and Cancer, vol. 54, pp. 303 - 314, http://dx.doi.org/10.1002/gcc.22243

Mina MM; Luciani F; Cameron B; Bull RA; Beard MR; Booth D; Lloyd AR, 2015, 'Resistance to hepatitis C virus: Potential genetic and immunological determinants', The Lancet Infectious Diseases, vol. 15, pp. 451 - 460, http://dx.doi.org/10.1016/S1473-3099(14)70965-X

Bull RA; Leung P; Gaudieri S; Deshpande P; Cameron B; Walker M; Chopra A; Lloyd AR; Luciani F; Dolan K; Haber P; Rawlinson W; Treloar C; Dore G; Maher L, 2015, 'Transmitted/founder viruses rapidly escape from CD8⁺ T cell responses in acute hepatitis C virus infection', Journal of Virology, vol. 89, pp. 5478 - 5490, http://dx.doi.org/10.1128/JVI.03717-14

Applegate TL; Gaudieri S; Plauzolles A; Chopra A; Grebely J; Lucas M; Hellard M; Luciani F; Dore GJ; Matthews GV, 2015, 'Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C', Antiviral Therapy, vol. 20, pp. 199 - 208, http://dx.doi.org/10.3851/IMP2821

Eltahla AA; Luciani F; White PA; Lloyd AR; Bull RA, 2015, 'Inhibitors of the hepatitis C virus polymerase; mode of action and resistance', Viruses, vol. 7, pp. 5206 - 5224, http://dx.doi.org/10.3390/v7102868

Arcuri C; Luciani F; Piva P; Bartuli FN; Ottria L; Mecheri B; Licoccia S, 2015, 'Dentistry waste treatment through enzymatic fuel cells', ORAL and Implantology, vol. 8, pp. 12 - 18

Luciani F; Piva P; Caddeo F; Bartuli FN; Arcuri C, 2015, 'Medical waste to energy: Is it possible?', International Journal of Clinical Dentistry, vol. 7, pp. 383 - 388

Bretaña N; Boelen L; Bull R; Teutsch S; White P; Lloyd A; Luciani F, 2015, 'Transmission of Hepatitis C Virus among Prisoners, Australia, 2005–2012.', Emerging Infectious Diseases, vol. 21, pp. 765 - 774, http://dx.doi.org/10.3201/eid2105.141832

Ayres A; Yuen L; Jackson KM; Manoharan S; Glass A; Maley M; Yoo W; Hong SP; Kim SO; Luciani F; Bowden DS; Bayliss J; Levy MT; Locarnini SA, 2014, 'Short duration of lamivudine for the prevention of hepatitis B virus transmission in pregnancy: Lack of potency and selection of resistance mutations', Journal of Viral Hepatitis, vol. 21, pp. 809 - 817, http://dx.doi.org/10.1111/jvh.12212

Tu T; Budzinska M; McCaughan GW; McLennan SV; Luciani F; Shackel N, 2014, 'DELETERIOUS PASSENGER MUTATIONS AS A BIOMARKER FOR HEPATOCELLULAR CARCINOMA', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, vol. 10, pp. 44 - 44, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000344745100124&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), vol. 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), vol. 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Boelen L; Teutsch S; Wilson DP; Dolan K; Dore GJ; Lloyd AR; Luciani F, 2014, 'Per-event probability of hepatitis C infection during sharing of injecting equipment', PLoS ONE, vol. 9, http://dx.doi.org/10.1371/journal.pone.0100749

Bellavista E; Santoro A; Galimberti D; Comi C; Luciani F; Mishto M, 2014, 'Current understanding on the role of standard and immunoproteasomes in inflammatory/immunological pathways of multiple sclerosis', Autoimmune Diseases, vol. 2014, http://dx.doi.org/10.1155/2014/739705

McElroy K; Thomas T; Luciani F, 2014, 'Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions.', Microb Inform Exp, vol. 4, pp. 1, http://dx.doi.org/10.1186/2042-5783-4-1

Töpfer A; Marschall T; Bull RA; Luciani F; Schönhuth A; Beerenwinkel N, 2014, 'Viral quasispecies assembly via maximal clique enumeration', Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 8394 LNBI, pp. 309 - 310, http://dx.doi.org/10.1007/978-3-319-05269-4-25

Leung P; Bull R; Lloyd A; Luciani F, 2014, 'A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection', BioMed Research International, vol. 2014, pp. 1 - 12, http://dx.doi.org/10.1155/2014/264519

Bartuli FN; Piva P; Savo A; Di Dio M; Luciani F; Arcuri C, 2014, 'Lower third molar germectomy: The flap recovery on the lower second molar. a clinical study', International Journal of Clinical Dentistry, vol. 7, pp. 289 - 294

Arcuri C; Luciani F; Piva P; Bartuli FN; Ottria L; Mecheri B; Licoccia S, 2014, 'Medical waste to energy: Experimental study', ORAL and Implantology, vol. 6, pp. 83 - 88, http://dx.doi.org/10.11138/orl/2013.6.4.083

Sugden PB; Cameron B; Luciani F; Lloyd AR, 2014, 'Exploration of genetically determined resistance against hepatitis C infection in high-risk injecting drug users', Journal of Viral Hepatitis, vol. 21, pp. e65 - e73, http://dx.doi.org/10.1111/jvh.12232

Hartfield M; Bull R; White PA; Lloyd A; Luciani F; Alizon S, 2014, 'Evidence that hepatitis C virus genome partly controls infection outcome', Evolutionary Applications, vol. 7, pp. 533 - 547, http://dx.doi.org/10.1111/eva.12151

Sugden PB; Cameron B; Mina M; Lloyd AR, 2014, 'Protection against hepatitis C infection via NK cells in highly-exposed uninfected injecting drug users', Journal of Hepatology, vol. 61, pp. 738 - 745, http://dx.doi.org/10.1016/j.jhep.2014.05.013

Bartuli FN; Piva P; Caddeo F; Luciani F; Arcuri C, 2013, 'Squamous cell carcinoma of the oral cavity and hyperhomocysteinemia. There's a correlation? A preliminary study', International Journal of Clinical Dentistry, vol. 6, pp. 219 - 225

Luciani F; Cecchetti F; Piva P; Motta A; Bartuli FN; Arcuri C, 2013, 'Gingival hypertrophy- hyperplasia? peripheral ameloblastoma!', International Journal of Clinical Dentistry, vol. 6, pp. 1 - 10

Bartuli FN; Luciani F; Caddeo F; De Chiara L; Di Dio M; Piva P; Ottria L; Arcuri C, 2013, 'Piezosurgery vs high speed rotary handpiece: A comparison between the two techniques in the impacted third molar surgery', ORAL and Implantology, vol. 6, pp. 5 - 10, http://dx.doi.org/10.11138/orl/2013.6.1.005

Sugden PB; Pham TN; Ratnarajah S; Cameron B; Bull R; White PA; Michalak TI; Lloyd AR, 2013, 'Rare occurrence of occult hepatitis C virus in apparently uninfected injecting drug users: a two-centre, masked, case-control study', J Viral Hepat, vol. 20, pp. 725 - 728, http://dx.doi.org/10.1111/jvh.12098

Luciani F; Sanders MT; Oveissi S; Pang KC; Chen W, 2013, 'Increasing viral dose causes a reversal in CD8+ T cell immunodominance during primary influenza infection due to differences in antigen presentation, T cell avidity, and precursor numbers', Journal of Immunology, vol. 190, pp. 36 - 47, http://dx.doi.org/10.4049/jimmunol.1200089

Cameron B; Galbraith S; Li H; Lloyd A; HITS investigators , 2013, 'Correlates and characteristics of hepatitis C virus-specific T-cell immunity in exposed uninfected high-risk prison inmates', Journal of Viral Hepatitis, vol. 20, pp. e96 - e106, http://dx.doi.org/10.1111/jvh.12016

Mccredie L; Luciani F; Teutsch S; Amin J; Topp L; Dolan K; Lloyd A, 2012, 'BLOODY PRISONS: INCIDENCE OF RISK BEHAVIOURS AND HEPATITIS C VIRUS TRANSMISSION IN AN AUSTRALIAN PRISONER COHORT', DRUG AND ALCOHOL REVIEW, vol. 31, pp. 57 - 57, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000311236700175&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Luciani F; Bull RA; Lloyd AR; Bull , 2012, 'Next generation deep sequencing and vaccine design: Today and tomorrow', Trends in Biotechnology, vol. 30, pp. 443 - 452, http://dx.doi.org/10.1016/j.tibtech.2012.05.005

Bull RA; Eden J-S; Luciani F; McElroy K; Rawlinson WD; White PA, 2012, 'Contribution of intra- and interhost dynamics to norovirus evolution', Journal of Virology, vol. 86, pp. 3219 - 3229, http://dx.doi.org/10.1128/JVI.06712-11

McElroy KE; Luciani F; Thomas T, 2012, 'GemSIM: General, Error-Model based SIMulator of next-generation sequencing data', BMC Genomics, vol. 13, pp. 1 - 9, http://dx.doi.org/10.1186/1471-2164-13-74

Nguyen N; Luciani F; Cameron B; Keoshkerian E; Zekry A; Lloyd A, 2012, '801 T CELLS CO-EXPRESSING CCR2, CCR5, CXCR3, AND CXCR6 ARE PREFERENTIALLY ENRICHED IN THE HCV-INFECTED LIVER', Journal of Hepatology, vol. 56, pp. S313 - S313, http://dx.doi.org/10.1016/s0168-8278(12)60813-7

Bartuli FN; Luciani F; Caddeo F; Panetta V; Nisi A; Cecchetti F; Arcuri C, 2011, 'Biopsy of oral cavity: A retrospective study 10 years', International Journal of Clinical Dentistry, vol. 4, pp. 329 - 341

Bull RA; Luciani F; McElroy K; Gaudieri S; Pham ST; Chopra A; Cameron B; Maher L; Dore GJ; White PA; Lloyd AR, 2011, 'Sequential Bottlenecks Drive Viral Evolution in Early Acute Hepatitis C Virus Infection', PLoS Pathog, vol. 7, pp. e1002243, http://dx.doi.org/10.1371/journal.ppat.1002243

Samuel A; Regoes RR; Luciani F, 2011, 'Epidemiological and clinical consequences of within-host evolution.', Trends in Microbiology, vol. 19, pp. 24 - 32, http://dx.doi.org/10.1016/j.tim.2010.09.005

McElroy K; Luciani F; Hui J; Rice S; Thomas T, 2011, 'Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification', BMC Bioinformatics, vol. 12, pp. A2 - A2, http://dx.doi.org/10.1186/1471-2105-12-S11-A2

Cecchetti F; Luciani F; Serafico L; Bartuli FN; Arcuri C, 2010, 'Floor of the mouth's lipoma: A retrospective study ten years', International Journal of Clinical Dentistry, vol. 3, pp. 111 - 120

Mclean A; Luciani F; Tanaka M, 2010, 'Trade-offs in resource allocation in the intracellular life-cycle of hepatitis C virus', Journal of Theoretical Biology, vol. 267, pp. 565 - 572, http://dx.doi.org/10.1016/j.jtbi.2010.09.031

Luciani F; Sisson SA; Jiang H; Francis AR; Tanaka M, 2009, 'The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis', Proceedings of the National Academy of Sciences of the United States of America, vol. 106, pp. 14711 - 14715, http://dx.doi.org/10.1073/pnas.0902437106

Mishto M; Luciani F; Holzhutter H; Bellavista E; Santoro A; Textoris-Taube K; Franceschi C; Kloetzel P; Zaikin A, 2008, 'Proteasome modelling algorithm to predict in vitro kinetics of 20S proteasome degradation', Journal of Molecular Biology, vol. 377, pp. 1607 - 1617, http://dx.doi.org/10.1016/j.jmb.2008.01.086

Tang C; Reyes JF; Luciani F; Francis AR; Tanaka M, 2008, 'spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex', Bioinformatics, vol. 24, pp. 2414 - 2415, http://dx.doi.org/10.1093/bioinformatics/btn434

Mishto M; Luciani F; Holzhutter H; Bellavista E; Santoro A; Textoris-Taube K; Franceschi C; Kloetzel P; Zaikin A, 2008, 'Modeling the in vitro 20S proteasome activity: The effect of PA28-alpha beta and of the sequence and length of polypeptides on the degradation kinetics', Journal of Molecular Biology, vol. 377, pp. 1607 - 1617, http://dx.doi.org/10.1016/j.jmb.2008.01.086

Luciani F; Francis AR; Tanaka M, 2008, 'Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping', Infection Genetics and Evolution, vol. 8, pp. 182 - 190, http://dx.doi.org/10.1016/j.meegid.2007.12.004

Pomati F; Orlandi C; Clerici M; Luciani F; Zuccato E, 2008, 'Effects and interactions in an environmentally relevant mixture of pharmaceuticals', Toxicological Sciences, vol. 102, pp. 129 - 137, http://dx.doi.org/10.1093/toxsci/kfm291

Tanaka M; Francis AR; Luciani F; Sisson SA, 2006, 'Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data', Genetics, vol. 173, pp. 1511 - 1520, http://dx.doi.org/10.1534/genetics.106.055574

Luciani F; Kesmir C; Mishto M; Or-guil M; De Boer RJ, 2005, 'A mathematical model of protein degradation by the proteasome', Biophysical Journal, vol. 88, pp. 2422 - 2432, http://dx.doi.org/10.1529/biophysj.104.049221

Bertuccio SN; Pellicanò S; Calzone R; Ranieri SF; Rombolà F; Bertuccio A; Luciani F, 2004, 'Prophylaxis of Herpes simplex virus. Personal experience', Gazzetta Medica Italiana Archivio per le Scienze Mediche, vol. 163, pp. 1 - 3

Pellicanò S; Calzone R; Luciani F; Terra M; Terra L, 2004, 'Acute anicteric viral hepatitis type A with anomalous course. A case report', Gazzetta Medica Italiana Archivio per le Scienze Mediche, vol. 163, pp. 27 - 30

Terra M; Pellicanò S; Calzone R; Luciani F; Terra L; Terra R, 2004, 'Hematologic changes during AIDS infection. A case report', Gazzetta Medica Italiana Archivio per le Scienze Mediche, vol. 163, pp. 19 - 21

Polidori C; Luciani F; Fedeli A; Geary N; Massi M, 2003, 'Leptin fails to reduce ethanol intake in Marchigian Sardinian alcohol-preferring rats', Peptides, vol. 24, pp. 1441 - 1444, http://dx.doi.org/10.1016/j.peptides.2003.09.008

Fedeli D; Fedeli A; Luciani F; Massi M; Falcioni G; Polidori C, 2003, 'Lymphocyte DNA alteration by sub-chronic ethanol intake in alcohol-preferring rats', Clinica Chimica Acta, vol. 337, pp. 43 - 48, http://dx.doi.org/10.1016/S0009-8981(03)00329-2

Luciani F; Valensin S; Vescovini R; Sansoni P; Fagnoni F; Franceschi C; Bonafè M; Turchetti G, 2001, 'A stochastic model for CD8⁺ T cell dynamics in human immunosenescence: Implications for survival and longevity', Journal of Theoretical Biology, vol. 213, pp. 587 - 597, http://dx.doi.org/10.1006/jtbi.2001.2433

Luciani F; Turchetti G; Franceschi C; Valensin S, 2001, 'A Mathematical Model for the Immunosenescence', Rivista di Biologia - Biology Forum, vol. 94, pp. 305 - 318

1. D. Bradshaw, B. Jacka, F. Lamoury, T.L. Applegate, G.J. Dore, I. Down, G. Matthews, R. Sacks-Davis, M. Hellard, F. Luciani, M. Danta, J. Sasadeusz , 2014, 'A novel method comparing sexual networks with the HCV phylogeny in HIV-positive men who have sex with men (MSM) with acute HCV infection identifies two potential intervention targets for permucosally transmitted HCV', in A novel method comparing sexual networks with the HCV phylogeny in HIV-positive men who have sex with men (MSM) with acute HCV infection identifies two potential intervention targets for permucosally, AASLD, Boston, presented at AASLD, Boston, 05 November 2014 - 09 November 2014

Bradshaw D; Jacka B; Sacks-Davis R; Lamoury F; Applegate T; Dore G; Down I; Luciani F; Hellard M; Sasadeusz J; Danta M; Matthews G, 2014, 'A novel method comparing sexual networks with the HCV phylogeny in HIV-positive MSM with acute HCV infection identifies two potential intervention targets for permucosally transmitted HCV in Australia', in HIV MEDICINE, WILEY-BLACKWELL, pp. 136 - 136, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000333652300418&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Töpfer A; Marschall T; Bull RA; Luciani F; Schönhuth A; Beerenwinkel N, 2014, 'Viral quasispecies assembly via maximal clique enumeration', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 309 - 310, http://dx.doi.org/10.1007/978-3-319-05269-4_25

Bradshaw D; Jacka B; Sacks-Davis R; Lamoury F; Applegate TL; Dore GJ; Down I; Luciani F; Hellard M; Sasadeusz J; Danta M; Matthews G, 2013, 'A novel method comparing sexual networks with the HCV phylogeny in HIV-positive men who have sex with men (MSM) with acute HCV infection identifies two potential intervention targets for permucosally-transmitted HCV', in HEPATOLOGY, WILEY-BLACKWELL, Washington, DC, pp. 1307A - 1307A, presented at 64th Annual Meeting and Postgraduate Course of the American-Association-for-the-Study-of-Liver-Diseases, Washington, DC, 01 November 2013 - 05 November 2013, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000330252206224&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Boelen L; Bull RA; Teutsch S; Lloyd AR; Luciani F, 2013, 'MOLECULAR EPIDEMIOLOGY AND SOCIAL NETWORK ANALYSIS TO TRACK HCV TRANSMISSION IN HIGH-RISK COMMUNITIES: INJECTING DRUG USERS IN PRISONS OF NEW SOUTH WALES, AUSTRALIA', in JOURNAL OF HEPATOLOGY, ELSEVIER SCIENCE BV, Amsterdam, NETHERLANDS, pp. S193 - S193, presented at International Liver Congress / 48th Annual Meeting of the European-Association-for-the-Study-of-the-Liver (EASL), Amsterdam, NETHERLANDS, 24 April 2013 - 28 April 2013, http://dx.doi.org/10.1016/S0168-8278(13)60473-0

Luciani F; Bull RA; Cameron B; Gaudieri S; Nguyen N; Yuen D; White PA; Purcell DFJ; Foung S; Lloyd AR, 2012, 'IMMUNE RESPONSES AGAINST FOUNDER HEPATITIS C VIRUSES IN ACUTE ASYMPTOMATIC SUBJECTS', in JOURNAL OF HEPATOLOGY, ELSEVIER SCIENCE BV, Barcelona, SPAIN, pp. S312 - S312, presented at 47th Annual Meeting of the European-Association-for-the-Study-of-the-Liver (EASL), Barcelona, SPAIN, 18 April 2012 - 22 April 2012, http://dx.doi.org/10.1016/S0168-8278(12)60809-5

Luciani F; McElroy K ; J Hui ; S Rice ; Thomas T , 2011, '13. K McElroy, F Luciani, J Hui, S Rice, T Thomas Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification. 2011 BMC Bioinformatics 12 (Suppl 11), A2', in 13. K McElroy, F Luciani, J Hui, S Rice, T Thomas Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification. 2011 BMC Bioinformatics 12 (Suppl 11), A2, Highlights from the Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011, Vienna (Austria), presented at Highlights from the Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011, Vienna (Austria), 11 July 2011 - 15 July 2011

Luciani F; Bull R; Mcelroy K; Pham S; Cameron B; Chopra A; Gaudieri S; Cooper D; Lloyd A; White P, 2011, 'EVOLUTIONARY DYNAMICS OF HEPATITIS C VIRUS DURING VERY EARLY INFECTIONS: VIROLOGICAL AND IMMUNOLOGICAL INSIGHTS', in JOURNAL OF HEPATOLOGY, ELSEVIER, Berlin, GERMANY, pp. S18 - S18, presented at 46th Annual Meeting of the European-Association-for-the-Study-of-the-Liver (EASL), Berlin, GERMANY, 30 March 2011 - 03 April 2011, http://dx.doi.org/10.1016/S0168-8278(11)60040-8

Luciani F; Bull R; McElroy K ; Pham S ; Cameron B ; Chopra A ; Gaudieri S ; Cooper D ; Lloyd A ; White P , 2011, 'EVOLUTIONARY DYNAMICS OF HEPATITIS C VIRUS DURING VERY EARLY INFECTIONS: VIROLOGICAL AND IMMUNOLOGICAL INSIGHTS', in EVOLUTIONARY DYNAMICS OF HEPATITIS C VIRUS DURING VERY EARLY INFECTIONS: VIROLOGICAL AND IMMUNOLOGICAL INSIGHTS, International Liver Conference 2011, Berlin, presented at International Liver Conference 2011, Berlin, 30 March 2011 - 01 April 2011

Or-guil M; Luciani F; Carneiro J, 2004, 'Clonal expansion of cytotoxic T cell clones: the role of the Immunoproteasome', in Proceedings of the 5th Symposium on Mathematical and Computational Biology, E-papers Servicos Editoriais, Brazil, presented at 5th Symposium on Mathematical and Computational Biology

Turchetti G; Luciani F; Mariani L, 2002, 'Environmental randomness and survival probability', in Mathematical Modelling in Biology and Medicine, Co., Bologna, Italy, presented at 5th ESMTB Conference, Milano, Italy, 02 July 2002 - 06 July 2002

MARIANI L; TURCHETTI G; LUCIANI F, 2002, 'STOCHASTIC MODELS OF IMMUNE SYSTEM AGING', in Modelling Biomedical Signals, WORLD SCIENTIFIC, pp. 80 - 89, presented at Modelling Biomedical Signals, http://dx.doi.org/10.1142/9789812778055_0007

Rodrigo C; Eltahla A; Bull R; Luciani F; Lloyd A, 2017, 'Establishment of InC3 viral sequence repository and its applications', Barossa Valley, Australia, presented at 12th National Scientific Workshop of the Australian Center for HIV and Hepatitis Virology Research, Barossa Valley, Australia

Rodrigo C; Eltahla A; Bull R; Lloyd A; Luciani F, 2016, 'Bayesian evolutionary analysis of hepatitis C epidemic in Australia and North America in 20th century', GoldCoast, Australia, presented at Australasian Viral Hepatitis Conference, GoldCoast, Australia

Rodrigo C; Eltahla A; Bull R; Lloyd A; Luciani F, 2016, 'Bayesian evolutionary analysis of hepatitis C epidemic in Australia and North America in 20th century', Barcelona, Spain, presented at International conference in Systems Biology, Barcelona, Spain

Rodrigo C; Eltahla A; Bull R; Lloyd A; Luciani F, 2016, 'Broadly neutralizing antibodies against hepatitis C envelope; using a network approach to understand co-evolution of critical residues', Barcelona, Spain, presented at International conference in Systems Biology, Barcelona, Spain

Rodrigo C; Bretana N; Luciani F; Lloyd A; Bull R, 2016, 'Examining past and future hepatitis C virus epidemic trends in the era of directly acting antivirals', Perth, Australia, presented at Australian Society of Microbiology annual scientific meeting, Perth, Australia

Rodrigo C; Eltahla A; Bull R; Luciani F; Lloyd A, 2016, 'Molecular epidemiology of full length hepatitis C virus genomes among injecting drug users with recent infection: The InC3 study', Oslo, Norway, presented at 5th International Symposium on Hepatitis Care in Substance Users, Oslo, Norway

Rodrigo C; Eltahla A; Bull R; Luciani F; Lloyd A, 2016, 'Trends of Hepatitis C virus infections in North America and Australia in 20th century; back projections from molecular epidemiology', Oslo, Norway, presented at 5th International Symposium on Hepatitis Care in Substance Users, Oslo, Norway

Rodrigo C; Eltahla A; Bull R; Luciani F; Lloyd A, 2015, 'Global molecular epidemiology of acute hepatitis infection via phylogenetic analysis of full length genomes across nine international cohorts', Hunter Valley, Australia, presented at 11th National Scientific Workshop of the Australian Center for HIV and Hepatitis Virology Research, Hunter Valley, Australia

Eltahla A; Rodrigo C; Bull R; Luciani F; Lloyd A, 2015, 'Natural prevalence of HCV resistance associated variants in treatment naïve patients across six genotypes', Hunter Valley, Australia, presented at 11th National Scientific Workshop of the Australian Center for HIV and Hepatitis Virology Research, Hunter Valley, Australia

Walker M; Leung P; Eltahla A; Rodrigo C; Luciani F; Foung S; Lloyd A; Bull R, 2015, 'Understanding the timing, breadth and potency of neutralising antibody responses against transmitted/founders', Hunter Valley, Australia, presented at 11th National Scientific Workshop of the Australian Center for HIV and Hepatitis Virology Research, Hunter Valley, Australia

Leung P; Walker M; Rodrigo C; Eltahla A; Bull R; Lloyd A; Luciani F, 2015, 'Identification of co-evolving mutations of the Hepatitis C virus in the context of immune escape against neutralizing antibody responses using a bioinformatics workflow', Hunter Valley, Australia, presented at 8th Australasian virology society meeting, Hunter Valley, Australia

Leung P; Walker M; Rodrigo C; Eltahla A; Bull R; Lloyd A; Luciani F, 2015, 'A network approach for the identification of co-evolving mutations in Hepatitis C Virus (HCV) in the context of immune escape against neutralizing antibody responses', Sydney, Australia, presented at COMBINE Student Symposium, Sydney, Australia

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing immune single cell multi-omics data with VDJView, http://dx.doi.org/10.1101/613083

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v3

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v2

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v1

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v4

Louie RHY; Cai C; Singh M; Deveson I; Ferguson J; Amos TG; McGuire HM; Samir J; Gowrishankar K; Adikari T; Balderas R; Bishop D; Gottlieb D; Blyth E; Micklethwaite K; Luciani F, CAR⁺ and CAR^- T cells differentiate into an NK-like subset that is associated with increased inflammatory cytokines following infusion, http://dx.doi.org/10.1101/2022.03.29.22273013