Journal articles
Goncharov M; Bagaev D; Shcherbinin D; Zvyagin I; Bolotin D; Thomas PG; Minervina AA; Pogorelyy MV; Ladell K; McLaren JE; Price DA; Nguyen THO; Rowntree LC; Clemens EB; Kedzierska K; Dolton G; Rius CR; Sewell A; Samir J; Luciani F; Zornikova KV; Khmelevskaya AA; Sheetikov SA; Efimov GA; Chudakov D; Shugay M, 2022, 'VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2', Nature Methods, vol. 19, pp. 1017 - 1019, http://dx.doi.org/10.1038/s41592-022-01578-0
Zhao Y; Cai C; Samir J; Palgen JL; Keoshkerian E; Li H; Bull RA; Luciani F; An H; Lloyd AR, 2021, 'Human CD8 T-stem cell memory subsets phenotypic and functional characterization are defined by expression of CD122 or CXCR3', European Journal of Immunology, vol. 51, pp. 1732 - 1747, http://dx.doi.org/10.1002/eji.202049057
Sullivan LC; Nguyen THO; Harpur CM; Stankovic S; Kanagarajah AR; Koutsakos M; Saunders PM; Cai Z; Gray JA; Widjaja JML; Lin J; Pietra G; Mingari MC; Moretta L; Samir J; Luciani F; Westall GP; Malmberg KJ; Kedzierska K; Brooks AG, 2021, 'Natural killer cell receptors regulate responses of HLA-E-restricted T cells', Science Immunology, vol. 6, http://dx.doi.org/10.1126/sciimmunol.abe9057
Samir J; Rizzetto S; Gupta M; Luciani F, 2020, 'Exploring and analysing single cell multi-omics data with VDJView', BMC Medical Genomics, vol. 13, pp. 29, http://dx.doi.org/10.1186/s12920-020-0696-z
Bagaev DV; Vroomans RMA; Samir J; Stervbo U; Rius C; Dolton G; Greenshields-Watson A; Attaf M; Egorov ES; Zvyagin IV; Babel N; Cole DK; Godkin AJ; Sewell AK; Kesmir C; Chudakov DM; Luciani F; Shugay M, 2020, 'VDJdb in 2019: Database extension, new analysis infrastructure and a T-cell receptor motif compendium', Nucleic Acids Research, vol. 48, pp. D1057 - D1062, http://dx.doi.org/10.1093/nar/gkz874
