Bretaña NA; Gray RR; Cunningham EB; Betz-Stablein B; Ribeiro R; Graw F; Luciani F; Lloyd AR, 2020, 'Combined treatment and prevention strategies for hepatitis C virus elimination in the prisons in New South Wales: a modelling study', Addiction, vol. 115, pp. 901 - 913, http://dx.doi.org/10.1111/add.14830
Gunaratnam P; Heywood AE; McGregor S; Jamil MS; McManus H; Mao L; Lobo R; Brown G; Hellard M; Marukutira T; Bretaña NA; Lang C; Medland N; Bavinton B; Grulich A; Guy R, 2019, 'HIV diagnoses in migrant populations in Australia—A changing epidemiology', PLoS ONE, vol. 14, http://dx.doi.org/10.1371/journal.pone.0212268
Bretaña NA; Gray R; Law M; Guy R, 2018, 'Aging of the HIV Population in Australia: A Modeling Study', Journal of Acquired Immune Deficiency Syndromes, vol. 79, pp. E115 - E116, http://dx.doi.org/10.1097/QAI.0000000000001870
Cunningham EB; Hajarizadeh B; Amin J; Bretana N; Dore GJ; Degenhardt L; Larney S; Luciani F; Lloyd AR; Grebely J, 2018, 'Longitudinal injecting risk behaviours among people with a history of injecting drug use in an Australian prison setting: The HITS-p study', International Journal of Drug Policy, vol. 54, pp. 18 - 25, http://dx.doi.org/10.1016/j.drugpo.2017.12.013
Cunningham EB; Hajarizadeh B; Bretana NA; Amin J; Betz-Stablein B; Dore GJ; Luciani F; Teutsch S; Dolan K; Lloyd AR; Grebely J; Haber P; Rawlinson W; Treloar C; Maher L, 2017, 'Ongoing incident hepatitis C virus infection among people with a history of injecting drug use in an Australian prison setting, 2005-2014: The HITS-p study', Journal of Viral Hepatitis, vol. 24, pp. 733 - 741, http://dx.doi.org/10.1111/jvh.12701
Kao HJ; Huang CH; Bretaña NA; Lu CT; Huang KY; Weng SL; Lee TY, 2015, 'A two-layered machine learning method to identify protein O-GlcNAcylation sites with O-GlcNAc transferase substrate motifs', BMC Bioinformatics, vol. 16, http://dx.doi.org/10.1186/1471-2105-16-S18-S10
Nguyen VN; Huang KY; Huang CH; Chang TH; Bretaña NA; Lai KR; Weng JTY; Lee TY, 2015, 'Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities', BMC Bioinformatics, vol. 16, http://dx.doi.org/10.1186/1471-2105-16-S1-S1
Bretaña N; Boelen L; Bull R; Teutsch S; White P; Lloyd A; Luciani F, 2015, 'Transmission of Hepatitis C Virus among Prisoners, Australia, 2005–2012.', Emerging Infectious Diseases, vol. 21, pp. 765 - 774, http://dx.doi.org/10.3201/eid2105.141832
Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), vol. 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643
Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), vol. 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643
Huang KY; Lu CT; Bretaña NA; Lee TY; Chang TH, 2013, 'ViralPhos: Incorporating a recursively statistical method to predict phosphorylation sites on virus proteins', BMC Bioinformatics, vol. 14, http://dx.doi.org/10.1186/1471-2105-14-S16-S10
Lu CT; Huang KY; Su MG; Lee TY; Bretaña NA; Chang WC; Chen YJ; Chen YJ; Huang HD, 2013, 'DbPTM 3.0: An informative resource for investigating substrate site specificity and functional association of protein post-translational modifications', Nucleic Acids Research, vol. 41, http://dx.doi.org/10.1093/nar/gks1229
Bretaña NA; Lu CT; Chiang CY; Su MG; Huang KY; Lee TY; Weng SL, 2012, 'Identifying protein phosphorylation sites with kinase substrate specificity on human viruses', PLoS ONE, vol. 7, http://dx.doi.org/10.1371/journal.pone.0040694
Hsu JBK; Bretaña NA; Lee TY; Huang HD, 2011, 'Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans.', PloS one, vol. 6
Lee TY; Lu CT; Chen SA; Bretaña NA; Cheng TH; Su MG; Huang KY, 2011, 'Investigation and identification of protein g-glutamyl carboxylation sites', 10th International Conference on Bioinformatics - 1st ISCB Asia Joint Conference 2011, InCoB 2011/ISCB-Asia 2011: Bioinformatics - Proceedings from Asia Pacific Bioinformatics Network (APBioNet), vol. 12
Lee TY; Lu CT; Chen SA; Bretaña NA; Cheng TH; Su MG; Huang KY, 2011, 'Investigation and identification of protein γ-glutamyl carboxylation sites', BMC Bioinformatics, vol. 12, http://dx.doi.org/10.1186/1471-2105-12-S13-S10
HsuJustin JBK; Bretaña NA; Lee TY; Huang HD, 2011, 'Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans', PLoS ONE, vol. 6, http://dx.doi.org/10.1371/journal.pone.0027567
Lee TY; Lin ZQ; Hsieh SJ; Bretaña NA; Lu CT, 2011, 'Exploiting maximal dependence decomposition to identify conserved motifs from a group of aligned signal sequences', Bioinformatics, vol. 27, pp. 1780 - 1787, http://dx.doi.org/10.1093/bioinformatics/btr291
Lee TY; Bretaña NA; Lu CT, 2011, 'PlantPhos: Using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity', BMC Bioinformatics, vol. 12, http://dx.doi.org/10.1186/1471-2105-12-261
Lu CT; Chen SA; Bretaña NA; Cheng TH; Lee TY, 2011, 'Carboxylator: Incorporating solvent-accessible surface area for identifying protein carboxylation sites', Journal of Computer-Aided Molecular Design, vol. 25, pp. 987 - 995, http://dx.doi.org/10.1007/s10822-011-9477-2
Bretana NA; Robati M; Rawat A; Pandey A; Khatri S; Kaushal K; Nair S; Cheang G; Abadia R, 2020, 'Predicting student success for programming courses in a fully online learning environment', in ICCE 2020 - 28th International Conference on Computers in Education, Proceedings, pp. 47 - 56
Cunningham EB; Hajarizadeh B; Amin J; Bretana NA; Luciani F; Degenhardt L; Larney S; Dore GJ; Lloyd AR; Grebely J, 2017, 'Injecting risk behaviours among people with a history of injecting drug use in an Australian prison setting, 2005-2014: the HITS-p study', in JOURNAL OF HEPATOLOGY, ELSEVIER SCIENCE BV, NETHERLANDS, Amsterdam, pp. S488 - S488, presented at International Liver Congress / 52nd Annual Meeting of the European-Association-for-the-Study-of-the-Liver, NETHERLANDS, Amsterdam, 19 April 2017 - 23 April 2017, http://dx.doi.org/10.1016/S0168-8278(17)31370-3
Cunningham EB; Luciani F; Hajarizadeh B; Betz-Stablein B; Bretana NA; Teutsch S; Dore GJ; Grebely J; Lloyd AR, 2016, 'STABLE INCIDENCE OF HEPATITIS C VIRUS INFECTION AMONG PEOPLE WITH A HISTORY OF INJECTING DRUG USE IN AN AUSTRALIAN PRISON SETTING, 2005-2014: THE HITS-P STUDY', in JOURNAL OF HEPATOLOGY, ELSEVIER SCIENCE BV, SPAIN, Barcelona, pp. S614 - S614, presented at EASL International Liver Congress, SPAIN, Barcelona, 13 April 2016 - 17 April 2016, http://dx.doi.org/10.1016/S0168-8278(16)01138-7
Cunningham EB; Hajarizadeh B; Amin J; Betz-Stablein B; Dore GJ; Luciani F; Teutsch S; Bretana NA; Dolan K; Lloyd AR; Grebely J, 2018, 'A161 ONGOING INCIDENT HEPATITIC C VIRUS INFECTION AMONG PEOPLE WITH A HISTORY OF INJECTING DRUG USE IN AN AUSTRALIAN PRISON SETTING', in Journal of the Canadian Association of Gastroenterology, Oxford University Press (OUP), Vol. 1, pp. 278 - 280, http://dx.doi.org/10.1093/jcag/gwy008.162
Kwon JA; Bretaña NA; Grant L; Galouzis J; Hoey W; Blogg J; Lloyd AR; Gray RT, 2021, The COVID-19 Incarceration Model: a tool for corrections staff to analyze outbreaks of COVID-19, Cold Spring Harbor Laboratory, http://dx.doi.org/10.1101/2021.02.18.21252032