Dr Kirston Barton

Smith MA; Ersavas T; Ferguson JM; Liu H; Lucas MC; Begik O; Bojarski L; Barton K; Novoa EM, 2020, 'Molecular barcoding of native RNAs using nanopore sequencing and deep learning', Genome Research, vol. 30, pp. 1345 - 1353, http://dx.doi.org/10.1101/GR.260836.120

Ruggieri A; Naumenko S; Smith MA; Iannibelli E; Blasevich F; Bragato C; Gibertini S; Barton K; Vorgerd M; Marcus K; Wang P; Maggi L; Mantegazza R; Dowling JJ; Kley RA; Mora M; Minassian BA, 2020, 'Multiomic elucidation of a coding 99-mer repeat-expansion skeletal muscle disease', Acta Neuropathologica, vol. 140, pp. 231 - 235, http://dx.doi.org/10.1007/s00401-020-02164-4

Field MA; Rosen BD; Dudchenko O; Chan EKF; Minoche AE; Edwards RJ; Barton K; Lyons RJ; Tuipulotu DE; Hayes VM; Omer AD; Colaric Z; Keilwagen J; Skvortsova K; Bogdanovic O; Smith MA; Aiden EL; Smith TPL; Zammit RA; Ballard JWO, 2020, 'Canfam-GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C', GigaScience, vol. 9, http://dx.doi.org/10.1093/gigascience/giaa027

Deveson IW; Madala BS; Blackburn J; Barker C; Wong T; Barton KM; Smith MA; Watkins DN; Mercer TR, 2019, 'Chiral DNA sequences as commutable controls for clinical genomics', Nature Communications, vol. 10, pp. 1342, http://dx.doi.org/10.1038/s41467-019-09272-0

Singh M; Al-Eryani G; Carswell S; Ferguson JM; Blackburn J; Barton K; Roden D; Luciani F; Giang Phan T; Junankar S; Jackson K; Goodnow CC; Smith MA; Swarbrick A, 2019, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', Nature Communications, vol. 10, pp. 3120, http://dx.doi.org/10.1038/s41467-019-11049-4

Corbett MA; Kroes T; Veneziano L; Bennett MF; Florian R; Schneider AL; Coppola A; Licchetta L; Franceschetti S; Suppa A; Wenger A; Mei D; Pendziwiat M; Kaya S; Delledonne M; Straussberg R; Xumerle L; Regan B; Crompton D; van Rootselaar AF; Correll A; Catford R; Bisulli F; Chakraborty S; Baldassari S; Tinuper P; Barton K; Carswell S; Smith M; Berardelli A; Carroll R; Gardner A; Friend KL; Blatt I; Iacomino M; Di Bonaventura C; Striano S; Buratti J; Keren B; Nava C; Forlani S; Rudolf G; Hirsch E; Leguern E; Labauge P; Balestrini S; Sander JW; Afawi Z; Helbig I; Ishiura H; Tsuji S; Sisodiya SM; Casari G; Sadleir LG; van Coller R; Tijssen MAJ; Klein KM; van den Maagdenberg AMJM; Zara F; Guerrini R; Berkovic SF; Pippucci T; Canafoglia L; Bahlo M; Striano P; Scheffer IE; Brancati F; Depienne C; Gecz J, 2019, 'Intronic ATTTC repeat expansions in STARD7 in familial adult myoclonic epilepsy linked to chromosome 2', Nature Communications, vol. 10, http://dx.doi.org/10.1038/s41467-019-12671-y

Hardwick SA; Bassett SD; Kaczorowski D; Blackburn J; Barton K; Bartonicek N; Carswell SL; Tilgner HU; Loy C; Halliday G; Mercer TR; Smith MA; Mattick JS, 2019, 'Targeted, high-resolution RNA sequencing of non-coding genomic regions associated with neuropsychiatric functions', Frontiers in Genetics, vol. 10, http://dx.doi.org/10.3389/fgene.2019.00309

Hamm JN; Erdmann S; Eloe-Fadrosh EA; Angeloni A; Zhong L; Brownlee C; Williams TJ; Barton K; Carswell S; Smith MA; Brazendale S; Hancock AM; Allen MA; Raftery MJ; Cavicchioli R, 2019, 'Unexpected host dependency of Antarctic Nanohaloarchaeota', Proceedings of the National Academy of Sciences of the United States of America, vol. 116, pp. 14661 - 14670, http://dx.doi.org/10.1073/pnas.1905179116

Singh M; Al-Eryani G; Carswell S; Ferguson J; Blackburn J; Barton K; Roden D; Luciani F; Phan T; Junankar S; Jackson K; Goodnow C; Smith M; Swarbrick A, 2018, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes, http://dx.doi.org/10.1101/424945

Deveson I; Madala BS; Blackburn J; Barker C; Wong T; Barton K; Smith M; Watkins N; Mercer T, 2018, 'Chiral DNA sequences as commutable reference standards for clinical genomics', BIORXIV, http://dx.doi.org/10.1101/404285

Hiener B; Horsburgh BA; Eden JS; Barton K; Schlub TE; Lee E; von Stockenstrom S; Odevall L; Milush JM; Liegler T; Sinclair E; Hoh R; Boritz EA; Douek D; Fromentin R; Chomont N; Deeks SG; Hecht FM; Palmer S, 2017, 'Identification of Genetically Intact HIV-1 Proviruses in Specific CD4⁺ T Cells from Effectively Treated Participants', Cell Reports, vol. 21, pp. 813 - 822, http://dx.doi.org/10.1016/j.celrep.2017.09.081

Winckelmann A; Barton K; Hiener B; Schlub TE; Shao W; Rasmussen TA; Østergaard L; Søgaard OS; Tolstrup M; Palmer S, 2017, 'Romidepsin-induced HIV-1 viremia during effective antiretroviral therapy contains identical viral sequences with few deleterious mutations', AIDS, vol. 31, pp. 771 - 779, http://dx.doi.org/10.1097/QAD.0000000000001400

Winckelmann A; Barton K; Hiener B; Shao W; Østergaard L; Rasmussen T; Søgaard O; Tolstrup M; Palmer S, 2017, 'A5 Peripheral blood cells contribute to HIV-1 viremia induced by romidepsin.', Virus Evol, vol. 3, http://dx.doi.org/10.1093/ve/vew036.004

Fromentin R; Massanella M; Vandergeeten C; Barton K; Hiener B; Chiu WW; Looney D; Ramgopal M; Richman DD; Trautmann L; Palmer S; Chomont N, 2017, 'In vivo massive expansion of a T-cell clone carrying a defective HIV genome: implication for the measurement of the HIV reservoir', Journal of Virus Eradication, vol. 3, pp. 21 - 22, http://dx.doi.org/10.1016/s2055-6640(20)30544-6

Barton K; Hiener B; Winckelmann A; Rasmussen TA; Shao W; Byth K; Lanfear R; Solomon A; McMahon J; Harrington S; Buzon M; Lichterfeld M; Denton PW; Olesen R; Østergaard L; Tolstrup M; Lewin SR; Søgaard OS; Palmer S, 2016, 'Broad activation of latent HIV-1 in vivo', Nature Communications, vol. 7, http://dx.doi.org/10.1038/ncomms12731

Barton K; Winckelmann A; Palmer S, 2016, 'HIV-1 Reservoirs During Suppressive Therapy', Trends in Microbiology, vol. 24, pp. 345 - 355, http://dx.doi.org/10.1016/j.tim.2016.01.006

Barton KM; Palmer SE, 2016, 'How to Define the Latent Reservoir: Tools of the Trade', Current HIV/AIDS Reports, vol. 13, pp. 77 - 84, http://dx.doi.org/10.1007/s11904-016-0304-1

Barton K; Hiener B; Winckelmann A; Rasmussen TA; Tolstrup M; Shao W; Olesen R; Denton PW; Solomon A; Østergaard L; Lewin SR; Søgaard OS; Palmer S, 2015, 'Peripheral blood CD4 + T cells and intestinal lamina propria mononuclear cells contribute to viremia following an analytical treatment interruption: a follow-up analysis of the panobinostat trial', Journal of Virus Eradication, vol. 1, pp. 30 - 30, http://dx.doi.org/10.1016/s2055-6640(20)31372-8

Barton KM; Archin NM; Keedy KS; Espeseth AS; Zhang YL; Gale J; Wagner FF; Holson EB; Margolis DM, 2014, 'Selective HDAC inhibition for the disruption of latent HIV-1 infection', PLoS ONE, vol. 9, http://dx.doi.org/10.1371/journal.pone.0102684

Barton KM; Burch BD; Soriano-Sarabia N; Margolis DM, 2013, 'Erratum: Prospects for Treatment of Latent HIV (Clinical Pharmacology and Therapeutics (2013) 93 (46-56) DOI: 10.1038/clpt.2012.202)', Clinical Pharmacology and Therapeutics, vol. 93, pp. 366, http://dx.doi.org/10.1038/clpt.2013.19

Barton K; Margolis D, 2013, 'Selective targeting of the repressive transcription factors YY1 and cMyc to disrupt quiescent human immunodeficiency viruses', AIDS Research and Human Retroviruses, vol. 29, pp. 289 - 298, http://dx.doi.org/10.1089/aid.2012.0227

Barton KM; Burch BD; Soriano-Sarabia N; Margolis DM, 2013, 'Prospects for treatment of latent HIV', Clinical Pharmacology and Therapeutics, vol. 93, pp. 46 - 56, http://dx.doi.org/10.1038/clpt.2012.202

Russell ES; Kwiek JJ; Keys J; Barton K; Mwapasa V; Montefiori DC; Meshnick SR; Swanstrom R, 2011, 'The genetic bottleneck in vertical transmission of subtype C HIV-1 is not driven by selection of especially neutralization-resistant virus from the maternal viral population', Journal of Virology, vol. 85, pp. 8253 - 8262, http://dx.doi.org/10.1128/JVI.00197-11

Barton KM; Levine EM, 2008, 'Expression patterns and cell cycle profiles of PCNA, MCM6, cyclin D1, cyclin A2, cyclin B1, and phosphorylated histone H3 in the developing mouse retina', Developmental Dynamics, vol. 237, pp. 672 - 682, http://dx.doi.org/10.1002/dvdy.21449

Chao K-H; Barton K; Palmer S; Lanfear R, 'sangeranalyseR: simple and interactive analysis of Sanger sequencing data in R', , http://dx.doi.org/10.1101/2020.05.18.102459

Du Q; Smith GC; Luu PL; Ferguson JM; Armstrong NJ; Caldon CE; Campbell E; Nair SS; Zotenko E; Gould CM; Buckley M; Kaczorowski D; Barton K; Deveson IW; Smith MA; Powell JE; Skvortsova K; Stirzaker C; Achinger-Kawecka J; Clark SJ, 'DNA methylation is required to maintain DNA replication timing precision and 3D genome integrity', , http://dx.doi.org/10.1101/2020.10.15.338855